Luminous data spiral revealing the A, T, C and G bases of DNA sequencing.

Biomarker discovery & R&D programmes

From sample to biological insight

GenXMap combines experimental multi-omics, bioinformatics and AI modelling to turn a biological question into results.

Core capabilities

Combining molecular technologies, computational biology and AI

Our workflow

One engagement, from scoping to report

  1. 01

    Scientific Scoping

    Your biological question turned into a study design: what to measure, on how many samples, and what has to hold up at the end.

    GenXMap
  2. 02

    Laboratory work

    Extraction and QC, sequencing, targeted quantification, protein analysis and extracellular vesicles, on our own OMICS4 platforms.

    OMICS4 · by GenXMap
  3. 03

    Bioinformatics

    Alignment, quantification, QC pipelines and statistical analysis.

    GenXMap
  4. 04

    Modelling & interpretation

    Models that narrow a long list of significant results down to the candidates worth following.

    GenXMap
  5. 05

    Scientific report

    Methods, parameters and results, documented so your team can build on them.

    GenXMap
Scoping & Design Hand-off Interpretation & Report

OMICS4 can also be booked on its own, if the analysis stays with you.

See how GenXMap runs your project

Expertise

Four building blocks, one team

Wet lab & multi-omics

Extraction, library preparation and sequencing on OMICS4, our wet-lab platform, driven by your biological objectives.

Bioinformatics

QC pipelines, principal component analysis, differential expression, functional enrichment.

AI interpretation

Inference models to prioritize the biological signals that matter in your data.

Dry lab & reporting

Structured scientific reports with documented methods and parameters, ready for your R&D teams.

Platforms · Marseille

  • Extraction & QC
  • NGS & Molecular Biology
  • Proteomics
  • Extracellular Vesicles
See the platforms →

Analysis & interpretation

  • Bioinformatics pipelines and quality control
  • Multi-omics integration
  • Biomarker discovery and validation
  • Structured scientific reporting
See computational biology & AI →

Both run in parallel on the same programme, under one scientific project lead: the design shapes the bench work, and the bench work is analysed by the people who designed it.

Industries

Solutions built for your sector

See all industries we serve

Our ecosystem

Integrated in one team, anchored in the clusters where the science happens

GenXMap is a member of Eurobiomed and France Biotech, is joining the Paris-Saclay Cancer Cluster and the Marseille Immunology Biocluster, and is established within the IHU Méditerranée Infection. That anchoring gives access to complementary expertise, clinical networks and technological platforms that reach beyond a single laboratory.

Clusters and biopoles

Paris-Saclay Cancer Cluster Marseille Immunology Biocluster IHU Mediterranee Infection Eurobiomed

Sample deliverable

What every GenXMap report contains

Every report follows the same six layers, whatever the data type. The methods change, the structure does not.

  • Quality control. Per-sample metrics against the acceptance thresholds set for the platform, with every sample reported rather than only those that fail.
  • Processing and quantification. Alignment, classification or identification against a versioned reference, with software versions and parameters recorded.
  • Exploratory analysis. Sample-level structure and similarity examined before any comparison, so batch effects and outliers are visible and stated.
  • Statistical comparison. Condition-versus-condition testing with multiple-testing correction, effect sizes reported alongside p-values.
  • Biological interpretation. Function, pathway or taxonomy-level analysis, with the limits of the design stated where the data do not support a firm conclusion.
  • Methods and reproducibility. Pipeline versions, reference builds, parameters and thresholds, sufficient to rerun the analysis.

Browse all resources

Bioinformatics report · Skin wound-healing study

Quality control, differential expression & functional enrichment

KEGG pathway enrichment, genes induced by the active ingredient GO biological process enrichment, genes induced by the active ingredient
Samples24 ex vivo skin explants
AlignmentSTAR 2-pass · GRCh38.p14 / GENCODE v43
NormalizationDESeq2 VST + apeglm shrinkage
EnrichmentGO & KEGG (clusterProfiler)
DEG thresholds|log2FC| > 1.5 · padj < 0.05 (BH)
OutputReport + figures + methods

Demonstration study (synthetic dataset), detailed format available on request.

Read the full case study →

Got a project in mind?

Let's talk about your sample, your biological question, your deadline.

A dedicated scientific team runs your project from sample to report.

Write to us